sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2PJP-B21-B22
X
>3ADB-D2-D3
X
>3KNI-A1171-A1172
X
>3CCJ-0205-0206
X
>3KNH-A779-A780
X
>3KNK-A499-A500
X
>1O0C-B9-B10
X
>3KNK-A2369-A2370
X
>3OHZ-A1128-A1129
X
>3OHZ-A2599-A2600
X
>3RW6-F31-F32
X
>3CUN-D37-D38
X
>3F1G-A1074-A1075
X
>1FJG-A1184-A1185
X
</seq>
<hsp>
0 1:0.239896781065
0 2:0.39114115928
0 3:1.0
0 4:0.876138787019
0 5:0.705412874136
0 6:0.224035433538
0 7:0.418587299097
0 8:0.815944251918
0 9:0.497098244026
0 10:0.545903852145
0 11:0.490543328493
0 12:0.629767870665
0 13:0.612881203902
1 2:0.323299010891
1 3:0.888068600834
1 4:0.830416939258
1 5:0.610314508532
1 6:0.230513487913
1 7:0.381163213448
1 8:0.710712107864
1 9:0.506481846153
1 10:0.503114187793
1 11:0.410927962739
1 12:0.590341293602
1 13:0.538886789766
2 3:0.643208519217
2 4:0.678605485883
2 5:0.412019807038
2 6:0.287483902866
2 7:0.20140770584
2 8:0.491266516633
2 9:0.29287597019
2 10:0.330954108516
2 11:0.211035677475
2 12:0.420505177407
2 13:0.343774408072
3 4:0.834437664983
3 5:0.436910809589
3 6:0.868783002759
3 7:0.675035274702
3 8:0.297058731687
3 9:0.621209925926
3 10:0.621305962832
3 11:0.562985938577
3 12:0.551848022707
3 13:0.512735267552
4 5:0.746884877159
4 6:0.700529651617
4 7:0.695605650252
4 8:0.706255830743
4 9:0.586088789909
4 10:0.470736328098
4 11:0.548541672799
4 12:0.581524172556
4 13:0.487002912235
5 6:0.545152849212
5 7:0.333167343535
5 8:0.457808196962
5 9:0.46276779016
5 10:0.366168089025
5 11:0.379739102689
5 12:0.481719839907
5 13:0.405112949314
6 7:0.27065590194
6 8:0.704364526368
6 9:0.39826346931
6 10:0.358018797914
6 11:0.34620132243
6 12:0.520398093396
6 13:0.465348665824
7 8:0.584811345334
7 9:0.333977487685
7 10:0.292623902762
7 11:0.288623899774
7 12:0.480600310922
7 13:0.39911069106
8 9:0.448184613492
8 10:0.48509505954
8 11:0.373386763423
8 12:0.325319857306
8 13:0.31489723456
9 10:0.25314088441
9 11:0.205944024715
9 12:0.241222896932
9 13:0.235848505821
10 11:0.193093746813
10 12:0.296838465347
10 13:0.203704021796
11 12:0.240622833589
11 13:0.142123598567
12 13:0.161649273292
</hsp>