sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QWY-B26-B27
X
>3OHD-A1346-A1347
X
>3R8T-A2351-A2352
X
>3R8O-A1494-A1495
X
>3F1H-A2642-A2643
X
>3R8T-A474-A475
X
>2J03-A569-A570
X
>3U5F-61753-61754
X
>3R8T-A1860-A1861
X
</seq>
<hsp>
0 1:0.563473220748
0 2:0.794163400173
0 3:0.369433985503
0 4:0.771081337669
0 5:0.705575591754
0 6:0.797226020822
0 7:0.37828652051
0 8:0.67152921176
1 2:0.79848869855
1 3:0.81135007776
1 4:0.344821600042
1 5:0.601327009266
1 6:0.495814222415
1 7:0.671590628009
1 8:0.742939164482
2 3:0.999989001355
2 4:0.714503493204
2 5:0.398909577757
2 6:0.778470227464
2 7:0.870986475481
2 8:0.94970522576
3 4:0.976542902556
3 5:0.841884105644
3 6:0.925285193097
3 7:0.247716090274
3 8:0.584363083445
4 5:0.492704910902
4 6:0.350371911614
4 7:0.796723083283
4 8:0.798359495829
5 6:0.492746874924
5 7:0.653235357386
5 8:0.671215630563
6 7:0.71623761089
6 8:0.576863908021
7 8:0.385346233832
</hsp>