sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5B-2645-2646
X
>3IQN-A92-A93
X
>3IQP-A92-A93
X
>3F1E-A1468-A1469
X
>3GX7-A92-A93
X
>2QEX-030-031
X
</seq>
<hsp>
0 1:0.617349842537
0 2:0.582113222868
0 3:0.505321670792
0 4:0.433494788284
0 5:0.560220099248
1 2:0.251917740521
1 3:0.999998122981
1 4:0.357320205102
1 5:0.531505827286
2 3:0.941776600102
2 4:0.312274505625
2 5:0.396672622038
3 4:0.725506530383
3 5:0.718739963075
4 5:0.278803995869
</hsp>