sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J01-A1700-A772
X
>2ZJR-X117-X47
X
>2J03-A1700-A772
X
>3F1H-A2705-A2855
X
>2OTL-053-060
X
>3G6E-053-060
X
>2QA4-053-060
X
>2OTJ-053-060
X
>3CCV-053-060
X
>3CCL-053-060
X
>1VQ4-053-060
X
>3CC4-053-060
X
>1VQN-053-060
X
>3R8S-A66-A73
X
>3F1E-A395-A477
X
>3F1G-A395-A477
X
</seq>
<hsp>
0 1:0.717332622202
0 2:0.0448119635316
0 3:0.732272795863
0 4:0.811680726119
0 5:0.802201887543
0 6:0.991127483064
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1 11:0.66254036242
1 12:0.687763744207
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1 15:0.716043162441
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8 9:0.10499531782
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11 12:0.132419116189
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12 13:0.385090857188
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12 15:0.447267480105
13 14:0.405837137613
13 15:0.412795087176
14 15:0.0251659592956
</hsp>