sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OI1-A2663-A2706
X
>3OHZ-A2663-A2706
X
>3R8T-A2827-A2870
X
>3OH5-A2663-A2706
X
>3OH7-A2663-A2706
X
>2J01-A2710-A2753
X
>2J03-A2710-A2753
X
>3F1H-A2817-A2860
X
</seq>
<hsp>
0 1:0.0956555198084
0 2:0.763506714001
0 3:0.521862437232
0 4:0.541495568913
0 5:0.72682143539
0 6:0.719906847412
0 7:1.0
1 2:0.724907753305
1 3:0.449600034752
1 4:0.47338130683
1 5:0.674725592885
1 6:0.670960331396
1 7:0.955964443423
2 3:0.749288316052
2 4:0.756206077905
2 5:0.55743867596
2 6:0.566484309603
2 7:0.846077258757
3 4:0.0700927113134
3 5:0.737981972025
3 6:0.763203922624
3 7:0.890349736014
4 5:0.742510568436
4 6:0.771505807844
4 7:0.923082670108
5 6:0.0721215509896
5 7:0.883965609689
6 7:0.865902063827
</hsp>