sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KFU-K18-K43
X
>3KFU-L18-L43
X
>2CSX-D21-D46
X
>3R8O-V20-V45
X
>2ZUF-B22-B47
X
>2ZM5-C20-C45
X
>3EPH-E18-E43
X
>2ZXU-C20-C45
X
>1U9S-A145-A35
X
>3BT7-C10-C5
X
>2J00-V21-V46
X
</seq>
<hsp>
0 1:0.00867495978025
0 2:0.357762683081
0 3:0.533469322074
0 4:0.707537481788
0 5:0.408174056684
0 6:0.443683059623
0 7:0.433696630458
0 8:0.718123518536
0 9:0.586932580557
0 10:0.835347697194
1 2:0.360863469855
1 3:0.530542955222
1 4:0.709182218794
1 5:0.405872925209
1 6:0.442933747546
1 7:0.433428810482
1 8:0.716806100677
1 9:0.585875375071
1 10:0.835168780261
2 3:0.553891990525
2 4:0.837326325394
2 5:0.346353376099
2 6:0.492723158305
2 7:0.339299750663
2 8:0.689157900594
2 9:0.649211889159
2 10:0.924749244248
3 4:0.98425821866
3 5:0.322856545577
3 6:0.536653062276
3 7:0.419521955646
3 8:0.702829657543
3 9:0.489642891263
3 10:0.823772228532
4 5:0.940093093773
4 6:0.809167230367
4 7:0.847234960944
4 8:0.999999455716
4 9:0.747641873361
4 10:0.701235949123
5 6:0.399268281291
5 7:0.202599313477
5 8:0.520464459975
5 9:0.495608653322
5 10:0.82907808975
6 7:0.363296753379
6 8:0.448379151196
6 9:0.549069367284
6 10:0.606617928098
7 8:0.412337472206
7 9:0.395137588736
7 10:0.706840757642
8 9:0.540968895191
8 10:0.671536838372
9 10:0.506947928197
</hsp>