sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OI0-A946-A945
X
>3OHY-A946-A945
X
>2VQE-A946-A945
X
>1N32-A946-A945
X
>3U5H-51251-51250
X
>1FJG-A946-A945
X
>2UUA-A946-A945
X
>2UUB-A946-A945
X
>3U5B-21095-21094
X
</seq>
<hsp>
0 1:0.050719987199
0 2:0.486168049213
0 3:0.836931260504
0 4:0.565820849019
0 5:0.782078117894
0 6:0.887410581592
0 7:0.624734096705
0 8:0.971997645911
1 2:0.508109940331
1 3:0.866512570721
1 4:0.578777533034
1 5:0.79608201211
1 6:0.913560916278
1 7:0.640785811864
1 8:0.999990266016
2 3:0.425059360237
2 4:0.364407039431
2 5:0.416219105335
2 6:0.425417934143
2 7:0.423957442825
2 8:0.597140054868
3 4:0.681048467464
3 5:0.506093002102
3 6:0.378471343137
3 7:0.505523679578
3 8:0.496468894687
4 5:0.631879634314
4 6:0.544979330604
4 7:0.656532245306
4 8:0.700301382654
5 6:0.506714856492
5 7:0.471469828245
5 8:0.648619237877
6 7:0.630599298021
6 8:0.373046755716
7 8:0.602422293729
</hsp>