sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ5-049-046
X
>1Q81-A49-A46
X
>1VQ7-049-046
X
>1FFK-049-046
X
>2QA4-049-046
X
>3OHK-A2139-A2138
X
>3OH7-A2139-A2138
X
>2HOO-A52-A51
X
</seq>
<hsp>
0 1:0.168735700536
0 2:0.073137068026
0 3:0.287130194087
0 4:0.267676828232
0 5:0.870885362699
0 6:0.981308913625
0 7:0.858013988446
1 2:0.137986531689
1 3:0.179163724243
1 4:0.196220650351
1 5:0.907457136492
1 6:0.988114966426
1 7:0.948214879344
2 3:0.255732833606
2 4:0.221493234434
2 5:0.887474945497
2 6:1.0
2 7:0.89090088696
3 4:0.23178948771
3 5:0.884702836195
3 6:0.958274079521
3 7:0.988887617381
4 5:0.862327892045
4 6:0.932527164762
4 7:0.875442397249
5 6:0.311711676104
5 7:0.601605404083
6 7:0.659010015101
</hsp>