sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCM-02752-02665
X
>1VQN-02752-02665
X
>1VQL-02752-02665
X
>1VQK-02752-02665
X
>2QBZ-X131-X14
X
>3PDR-X139-X14
X
>1FFK-02704-02617
X
>3G78-A243-A32
X
</seq>
<hsp>
0 1:0.0722195986981
0 2:0.108242376671
0 3:0.167583707587
0 4:0.917677688685
0 5:0.942397659829
0 6:0.358096726856
0 7:0.456070488532
1 2:0.060456710479
1 3:0.119606131772
1 4:0.910355729481
1 5:0.944587556733
1 6:0.321048255833
1 7:0.427953117324
2 3:0.14971415707
2 4:0.931748458999
2 5:0.96917129661
2 6:0.306925272177
2 7:0.43286551979
3 4:0.856789054114
3 5:0.889702964131
3 6:0.267518449924
3 7:0.354771751074
4 5:0.227794859261
4 6:0.985278126428
4 7:0.670045490698
5 6:0.999992923493
5 7:0.687415491191
6 7:0.351478845666
</hsp>