sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A757-A755
X
>1MJI-C8-C18
X
>1MJI-D8-D18
X
>3OH5-A405-A403
X
>3OH7-A405-A403
X
>2J03-A405-A403
X
>2J01-A405-A403
X
</seq>
<hsp>
0 1:0.999998290353
0 2:0.870481941862
0 3:0.69065260245
0 4:0.729505573421
0 5:0.758418918743
0 6:0.759912446096
1 2:0.210626686467
1 3:0.365688817239
1 4:0.343343014826
1 5:0.314417680137
1 6:0.315799064772
2 3:0.240009364114
2 4:0.227614855866
2 5:0.200050350958
2 6:0.202308793375
3 4:0.0539817680947
3 5:0.152932116714
3 6:0.17613660596
4 5:0.145339209549
4 6:0.171110294315
5 6:0.0353911823407
</hsp>