sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1KXK-A66-A67
X
>3U5H-51910-51911
X
>3OHJ-A683-A684
X
>3OH5-A683-A684
X
>3G8T-E9-E10
X
>3U5D-11906-11907
X
</seq>
<hsp>
0 1:0.844149859079
0 2:0.537672231509
0 3:0.407942680168
0 4:0.426057448793
0 5:0.817945337833
1 2:0.964522281036
1 3:0.86955753071
1 4:0.71798705639
1 5:0.999995548066
2 3:0.238862264627
2 4:0.373017218929
2 5:0.718681450147
3 4:0.349965457343
3 5:0.711940708784
4 5:0.789301053272
</hsp>