sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1N32-A906-A1321
X
>1XMQ-A906-A1316
X
>2UXC-A906-A1321
X
>2VQF-A906-A1321
X
>2UUB-A906-A1321
X
>2UUA-A906-A1321
X
>2J02-A906-A1321
X
>2J00-A906-A1321
X
</seq>
<hsp>
0 1:0.243537304631
0 2:0.284740546244
0 3:0.247064347561
0 4:0.476252743365
0 5:0.348651527253
0 6:0.868652081539
0 7:0.858202388226
1 2:0.249811583107
1 3:0.281560194323
1 4:0.350764140399
1 5:0.216006362194
1 6:0.996337721484
1 7:0.987795181586
2 3:0.220112640901
2 4:0.338748990267
2 5:0.255469987039
2 6:0.886859646888
2 7:0.873518051787
3 4:0.397297789806
3 5:0.23280773301
3 6:0.858936569781
3 7:0.850162281117
4 5:0.218189766825
4 6:1.0
4 7:0.992565871291
5 6:0.959977414363
5 7:0.954498996787
6 7:0.0370930600154
</hsp>