sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1ET4-C10-C14
X
>1ET4-B10-B14
X
>1ET4-A10-A14
X
>1DDY-G10-G14
X
>1DDY-E10-E14
X
>1DDY-C10-C14
X
</seq>
<hsp>
0 1:0.49292475497
0 2:0.535299842426
0 3:0.874019433925
0 4:1.0
0 5:0.917588966804
1 2:0.577269607039
1 3:0.548624949062
1 4:0.921128393298
1 5:0.755357756075
2 3:0.692794144914
2 4:0.552704351111
2 5:0.456284605065
3 4:0.747202473939
3 5:0.541697455084
4 5:0.409826371304
</hsp>