sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A248-A247
X
>2QA4-0208-0207
X
>3CXC-0208-0207
X
>1QVG-0208-0207
X
>1VQO-0208-0207
X
>3CCR-0208-0207
X
>3CCQ-0208-0207
X
>1K9M-A208-A207
X
>3CC7-0208-0207
X
>2OTL-0208-0207
X
>3G71-0208-0207
X
>1Q82-A208-A207
X
>1S72-0208-0207
X
>1K8A-A208-A207
X
</seq>
<hsp>
0 1:0.29312168611
0 2:0.915958216848
0 3:0.963777335812
0 4:0.956643877979
0 5:0.668110926108
0 6:0.91835586782
0 7:0.760705985189
0 8:1.0
0 9:0.93034501903
0 10:0.84037481272
0 11:0.76112675423
0 12:0.91345107161
0 13:0.809460288373
1 2:0.756301424775
1 3:0.806698644627
1 4:0.798416020689
1 5:0.50023091864
1 6:0.743289201913
1 7:0.582406363543
1 8:0.821510188547
1 9:0.759987168477
1 10:0.671189554772
1 11:0.6102527354
1 12:0.769042256866
1 13:0.633304304732
2 3:0.165475224335
2 4:0.176336714171
2 5:0.61005119685
2 6:0.223862770763
2 7:0.279433581243
2 8:0.19827428212
2 9:0.109918089506
2 10:0.241782261544
2 11:0.281454552001
2 12:0.251932103759
2 13:0.246069712367
3 4:0.22018938428
3 5:0.655448334196
3 6:0.179170771065
3 7:0.272451798718
3 8:0.197590206993
3 9:0.169062624903
3 10:0.278490115245
3 11:0.295935948927
3 12:0.219529491882
3 13:0.280494567538
4 5:0.590373866457
4 6:0.206093339423
4 7:0.36137320828
4 8:0.16370128149
4 9:0.193288021463
4 10:0.277903379402
4 11:0.295826797838
4 12:0.271278046888
4 13:0.309590346086
5 6:0.538677669726
5 7:0.558927450097
5 8:0.663717841193
5 9:0.653675830476
5 10:0.419220941016
5 11:0.589432750985
5 12:0.712930801735
5 13:0.61062961896
6 7:0.271893205183
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6 9:0.232205771854
6 10:0.19891096286
6 11:0.320000942564
6 12:0.2621364034
6 13:0.284241410918
7 8:0.3270599085
7 9:0.254804249594
7 10:0.298587109654
7 11:0.219176587632
7 12:0.281177217738
7 13:0.142533705725
8 9:0.139781587208
8 10:0.328526717652
8 11:0.312095867762
8 12:0.210315653765
8 13:0.26359572068
9 10:0.306346986788
9 11:0.242908915202
9 12:0.190638109989
9 13:0.190027924414
10 11:0.370247359728
10 12:0.389453721162
10 13:0.335811590313
11 12:0.24017612277
11 13:0.186009867917
12 13:0.223836017225
</hsp>