sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQL-02586-02585
X
>1VQM-02586-02585
X
>1VQP-02586-02585
X
>1VQN-02586-02585
X
>3CME-02586-02585
X
>1VQO-02586-02585
X
>1VQK-02586-02585
X
>1VQ9-02586-02585
X
</seq>
<hsp>
0 1:0.266373948589
0 2:0.291580098418
0 3:0.282760832422
0 4:0.756459533887
0 5:0.51433179526
0 6:0.62571295565
0 7:1.0
1 2:0.252077676522
1 3:0.335529772262
1 4:0.7552122087
1 5:0.531977514023
1 6:0.551483677107
1 7:0.964327600506
2 3:0.313347680373
2 4:0.627301421241
2 5:0.530892355184
2 6:0.490986256729
2 7:0.916302089794
3 4:0.650890539902
3 5:0.252883092432
3 6:0.381893559135
3 7:0.797791745885
4 5:0.690179282778
4 6:0.669280844373
4 7:0.479311255695
5 6:0.314021189445
5 7:0.688665817784
6 7:0.709898191006
</hsp>