sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A1907-A1906
X
>1VQ6-02050-02049
X
>3U5D-11104-11103
X
>1YI2-02050-02049
X
>1VQP-02050-02049
X
>1Q86-A2050-A2049
X
>1VQM-02050-02049
X
>1YJW-02050-02049
X
>3G6E-02050-02049
X
>3MUM-R85-R84
X
>1YIT-02050-02049
X
>3R8S-A2056-A2055
X
>1VQN-02050-02049
X
>1N8R-A2050-A2049
X
</seq>
<hsp>
0 1:0.534782854636
0 2:0.603962457138
0 3:0.398127867727
0 4:0.45887371401
0 5:0.469946584844
0 6:0.431579956362
0 7:0.652853463717
0 8:0.492488932262
0 9:1.0
0 10:0.640919925962
0 11:0.444563432945
0 12:0.580455839774
0 13:0.646190414073
1 2:0.89301375022
1 3:0.177860219597
1 4:0.104823944986
1 5:0.485889664757
1 6:0.153311209749
1 7:0.235773411791
1 8:0.485968389153
1 9:0.881256051382
1 10:0.217066829524
1 11:0.150644171339
1 12:0.147169993861
1 13:0.225906167973
2 3:0.833439613803
2 4:0.85035041476
2 5:0.786393343581
2 6:0.844244689468
2 7:0.901453308613
2 8:0.790653902896
2 9:0.818382999116
2 10:0.89451054664
2 11:0.799226864084
2 12:0.88728360465
2 13:0.892613535013
3 4:0.0886049354748
3 5:0.456318741217
3 6:0.0539128819576
3 7:0.350714758647
3 8:0.468693484957
3 9:0.969801819119
3 10:0.330383232828
3 11:0.123174706707
3 12:0.230378660884
3 13:0.332757173627
4 5:0.467439470987
4 6:0.0533214797026
4 7:0.272137004902
4 8:0.476601095119
4 9:0.928849995616
4 10:0.252978241483
4 11:0.0899529301342
4 12:0.154642721454
4 13:0.258468784918
5 6:0.460224537534
5 7:0.563827946787
5 8:0.0484187093602
5 9:0.9345553357
5 10:0.554984219991
5 11:0.462405673704
5 12:0.517195319878
5 13:0.555502641567
6 7:0.310173390459
6 8:0.473748791295
6 9:0.966354194776
6 10:0.290467014194
6 11:0.105758808859
6 12:0.182967122981
6 13:0.292614524003
7 8:0.565429324628
7 9:0.791560360501
7 10:0.0300802181395
7 11:0.253178322494
7 12:0.152980889265
7 13:0.0507532472197
8 9:0.909777731168
8 10:0.556363414107
8 11:0.470366744274
8 12:0.52507749382
8 13:0.557750278453
9 10:0.802419293322
9 11:0.881851046811
9 12:0.905215346769
9 13:0.81354544758
10 11:0.234459309739
10 12:0.13300579379
10 13:0.0377742205493
11 12:0.167084507566
11 13:0.236467044367
12 13:0.131554963088
</hsp>