sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1GID-A94-A93
X
>3CCR-02543-02542
X
>300D-B8-B7
X
>3KNK-A2153-A2152
X
>2J01-A2468-A2467
X
>2ZJR-X1319-X1318
X
>1F1T-A9-A8
X
</seq>
<hsp>
0 1:0.11269805159
0 2:0.272904409574
0 3:0.123950054717
0 4:0.133058779568
0 5:0.214923871893
0 6:0.912528095137
1 2:0.307384487153
1 3:0.108592173615
1 4:0.0912282686802
1 5:0.224826950422
1 6:0.838638612263
2 3:0.227021289676
2 4:0.25009996191
2 5:0.144020856547
2 6:0.999999837872
3 4:0.0497542425477
3 5:0.13910639677
3 6:0.919663790587
4 5:0.145642594402
4 6:0.892379300769
5 6:0.961470696836
</hsp>