ClaRNA

Doublet Group info: classifier/base-ribose/H_0BR/CC/sub-002

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-ribose
Desc: H_0BR/CC/sub-002
Members:
count: 62
download members
3R8S:A1721:A1720
3CCJ:01929:01928
3KNK:A1133:A1132
3NDB:M9:M8
2CT8:C43:C42
2ZJR:X1431:X1430
3MUR:R57:R56
3OHZ:A865:A864
1VBX:B4:B3
3OI1:A865:A864
2DXI:D62:D61
3KNK:A2719:A2718
1QVG:01325:01324
3GX3:A65:A64
1NJI:A1325:A1324
3R8S:A2882:A2881
1Q86:A1325:A1324
1YJN:01325:01324
2OIH:B4:B3
1N8R:A1325:A1324
1KD1:A2389:A2388
3I56:01325:01324
2ZJR:X750:X749
1N8R:A2389:A2388
3CCV:963:962
1FFK:01278:01277
2EEW:A46:A45
3L3C:R82:R81
2E9T:C4:C3
3CXC:02389:02388
3R8T:A634:A633
1N32:A1450:A1449
1G59:B4:B3
2J01:A2569:A2568
2O3X:A9:A8
1G59:D4:D3
3KNK:A190:A189
3CCR:0389:0388
3KOA:C1:C0
1VC6:B3:B2
1H3E:B71:B70
1N77:C62:C61
2VQE:A980:A979
3OHC:A121:A120
2VQE:A121:A120
2CV1:C62:C61
2UXC:A180:A179
3KNI:A500:A499
3OGE:A176:A175
3OGY:A176:A175
3OI1:A805:A804
3KNH:A1130:A1129
3OHK:A499:A498
3KNI:A2674:A2673
3F1G:A1304:A1303
2UXC:A121:A120
3F1E:A1304:A1303
3OHZ:A805:A804
2QA4:01720:01719
3OHY:A215:A214
3OI0:A215:A214
3KNI:A499:A498
Closest classifer groups: show all      show selected
Group Members RMSD
base-ribose/H_0BR 36 0.094
stacking/<> 1 0.098
base-phosphate/H_9BPh 2 0.100
base-phosphate/W_5BPh 10 0.120
stacking/<< 8 0.176
base-phosphate/W_3BPh 2 0.264
base-phosphate/H_0BPh 1 0.273
base-ribose/H_7BR 4 0.284
stacking/>> 47 0.306
base-phosphate/W_4BPh 27 0.384

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol