sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2VQF-A1139-A1138
X
>1XMQ-A1011-A1010
X
>1EHZ-A60-A59
X
>1EVV-A60-A59
X
>1GID-B108-B106
X
>3F1H-A1635-A1633
X
>3F1F-A1635-A1633
X
>3KNI-A1556-A1554
X
>3OHK-A1557-A1555
X
>3OHJ-A1557-A1555
X
>3OH5-A1557-A1555
X
>3OH7-A1557-A1555
X
>3OHZ-A1557-A1555
X
</seq>
<hsp>
0 1:0.356871693817
0 2:0.62336867584
0 3:0.620481507257
0 4:0.450972454705
0 5:0.850687407719
0 6:0.849449883147
0 7:0.907362251751
0 8:0.857941392568
0 9:0.862674320569
0 10:0.851463669145
0 11:0.851001758885
0 12:0.857858752344
1 2:0.766823100036
1 3:0.762376865922
1 4:0.218838378689
1 5:0.630885783223
1 6:0.630630560653
1 7:0.691933600434
1 8:0.641000623436
1 9:0.647102839241
1 10:0.63439765295
1 11:0.630975311285
1 12:0.64134327732
2 3:0.0233183547781
2 4:0.817548247677
2 5:0.929946209719
2 6:0.923843235544
2 7:0.998020665164
2 8:0.947554931625
2 9:0.946830812456
2 10:0.940796686098
2 11:0.941940981727
2 12:0.943293529461
3 4:0.815409973588
3 5:0.931209514578
3 6:0.925026773858
3 7:1.0
3 8:0.949473723654
3 9:0.948790663088
3 10:0.942506401067
3 11:0.943558913264
3 12:0.94482120245
4 5:0.485171863739
4 6:0.487345120944
4 7:0.527708253895
4 8:0.486518306717
4 9:0.493684845996
4 10:0.481642422703
4 11:0.479449732628
4 12:0.491783837208
5 6:0.0126489899336
5 7:0.131198487062
5 8:0.054655154801
5 9:0.0498581909754
5 10:0.0471460467076
5 11:0.0418349196996
5 12:0.0570826010825
6 7:0.14023855443
6 8:0.0644105761507
6 9:0.0590367345798
6 10:0.0574642064627
6 11:0.0522905891542
6 12:0.0657519497881
7 8:0.115917542652
7 9:0.112138393181
7 10:0.110478471079
7 11:0.112217134335
7 12:0.118320749139
8 9:0.0153702633435
8 10:0.0205876159405
8 11:0.0254781735662
8 12:0.0424378085289
9 10:0.0230480843637
9 11:0.0273988681388
9 12:0.0481968171395
10 11:0.0118865018859
10 12:0.0361364822323
11 12:0.0389206058735
</hsp>