sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A1456-A1455
X
>3U5H-734-733
X
>3R8T-A896-A895
X
>3U5H-51529-51528
X
>3F1G-A1015-A1014
X
>3F1E-A1015-A1014
X
>2QA4-959-958
X
>1ASZ-R73-R72
X
</seq>
<hsp>
0 1:0.314701788421
0 2:0.300300707088
0 3:0.550984346371
0 4:0.268819054312
0 5:0.268942101977
0 6:0.363045635584
0 7:0.999999758258
1 2:0.341529983746
1 3:0.494860070531
1 4:0.425387334039
1 5:0.423023171169
1 6:0.436491804703
1 7:0.951541737697
2 3:0.299932056373
2 4:0.185642142753
2 5:0.184678899741
2 6:0.177234086885
2 7:0.754138941601
3 4:0.439913713905
3 5:0.439659125308
3 6:0.380811035659
3 7:0.481637483135
4 5:0.00436634818347
4 6:0.153038536786
4 7:0.861942769842
5 6:0.151898508964
5 7:0.862302977088
6 7:0.790901948234
</hsp>