sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3SKW-B38-B37
X
>3R8T-A1600-A1599
X
>3U5B-2360-298
X
>3ADD-C11-C41
X
>3U5F-6357-698
X
>3ADB-D11-D45
X
>3ADC-C11-C41
X
>3ADB-C11-C45
X
</seq>
<hsp>
0 1:0.433077470106
0 2:0.903140133621
0 3:0.91696414145
0 4:0.917284465092
0 5:0.896901636128
0 6:0.934020077793
0 7:0.934634999339
1 2:0.952980029999
1 3:0.978305515305
1 4:0.980803533057
1 5:0.969949086676
1 6:0.998870090912
1 7:1.0
2 3:0.0747784372304
2 4:0.0452922542819
2 5:0.0772157869565
2 6:0.070071379484
2 7:0.0654276878677
3 4:0.0639072173778
3 5:0.0556541732157
3 6:0.0431821378755
3 7:0.0424078068704
4 5:0.0679469090192
4 6:0.0543013108631
4 7:0.0411979987751
5 6:0.0651128872739
5 7:0.0636683673747
6 7:0.0191053030756
</hsp>