sequences=18
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCM-02301-02270
X
>1VQN-02301-02270
X
>2QA4-02300-02269
X
>3CCR-02301-02270
X
>1VQ8-02301-02270
X
>1Q81-A2301-A2270
X
>3CCS-02301-02270
X
>1VQL-02301-02270
X
>1VQM-02301-02270
X
>1VQP-02301-02270
X
>3OHK-A2252-A2222
X
>3CD6-02301-02270
X
>3OHJ-A2252-A2222
X
>3OH7-A2252-A2222
X
>3OI1-A2252-A2222
X
>3OHZ-A2252-A2222
X
>3OH5-A2252-A2222
X
>3CCJ-01801-01800
X
</seq>
<hsp>
0 1:0.034003098083
0 2:0.084095670934
0 3:0.0815941219144
0 4:0.0271462202401
0 5:0.0368735599698
0 6:0.0311791979677
0 7:0.0318248182435
0 8:0.0322256326248
0 9:0.0295969713874
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0 11:0.0422854713916
0 12:0.386668072104
0 13:0.385978517047
0 14:0.389244340462
0 15:0.389684442922
0 16:0.385050820259
0 17:0.92142522755
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1 5:0.0433583885178
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3 4:0.0661061981499
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6 7:0.0217801822777
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7 8:0.0104207996585
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7 17:0.936062672732
8 9:0.0118474252089
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8 13:0.377798319408
8 14:0.380285336205
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9 10:0.383794497643
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12 13:0.0317357685564
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14 15:0.0107380299096
14 16:0.0150957144267
14 17:0.999834840872
15 16:0.0166859612043
15 17:1.0
16 17:0.997524942947
</hsp>