sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1H-A2803-A2802
X
>3F1F-A2803-A2802
X
>3KNI-A2327-A2297
X
>3U5B-21330-21328
X
>3F1H-A2406-A2376
X
>3F1F-A2406-A2376
X
>3OHZ-A2649-A2648
X
>3OI1-A2649-A2648
X
>1QVG-32-02301
X
</seq>
<hsp>
0 1:0.0028258653477
0 2:0.786316045914
0 3:0.425859739712
0 4:0.793040701613
0 5:0.795191816122
0 6:0.287005054553
0 7:0.28487979864
0 8:1.0
1 2:0.785344337048
1 3:0.425466070352
1 4:0.792112144655
1 5:0.794266738043
1 6:0.286928201689
1 7:0.284844915604
1 8:0.999396832535
2 3:0.569369374716
2 4:0.0850362756181
2 5:0.0872220677818
2 6:0.706454123875
2 7:0.711248359132
2 8:0.492600532059
3 4:0.546819895706
3 5:0.547600903199
3 6:0.38775627799
3 7:0.391350703812
3 8:0.799669612137
4 5:0.00616026669951
4 6:0.726253447719
4 7:0.731202768887
4 8:0.468654253723
5 6:0.727416430816
5 7:0.732386999819
5 8:0.46962303133
6 7:0.00738568917551
6 8:0.938477744703
7 8:0.942801650045
</hsp>