sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3GCA-A23-A18
X
>3Q50-A23-A18
X
>3Q51-A22-A17
X
>3KNI-A796-A693
X
>3OI1-A796-A693
X
>3OHZ-A796-A693
X
>2J03-A796-A693
X
>2J01-A796-A693
X
</seq>
<hsp>
0 1:0.0869631537217
0 2:0.0511725003331
0 3:0.84017918482
0 4:0.91570004673
0 5:0.90279911995
0 6:0.93942936867
0 7:0.938015435863
1 2:0.079169990062
1 3:0.905326364636
1 4:0.970358803761
1 5:0.958097008761
1 6:0.999999441308
1 7:0.998727860515
2 3:0.847751662485
2 4:0.917117669389
2 5:0.905293101953
2 6:0.948198257201
2 7:0.947042177561
3 4:0.210334030353
3 5:0.192342114446
3 6:0.195019983458
3 7:0.196888121617
4 5:0.0311765323465
4 6:0.272745196237
4 7:0.275372490533
5 6:0.250079901749
5 7:0.252373143358
6 7:0.0138835162605
</hsp>