sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A1712-A1711
X
>2J03-A1712-A1711
X
>2J01-A1712-A1711
X
>1Q81-A1801-A1800
X
>3OH5-A1712-A1711
X
>3R8S-A1780-A1779
X
>3R8T-A2813-A2812
X
</seq>
<hsp>
0 1:0.091353268747
0 2:0.0946135438472
0 3:0.89960367446
0 4:0.018672928049
0 5:0.906658726487
0 6:0.999999812462
1 2:0.00748008521267
1 3:0.915909295749
1 4:0.0909244599711
1 5:0.928378061858
1 6:0.994338745249
2 3:0.914610781987
2 4:0.0936705131614
2 5:0.927676899997
2 6:0.990507252183
3 4:0.89635009457
3 5:0.179292414202
3 6:0.47488130745
4 5:0.903543302604
4 6:0.994942973125
5 6:0.607578830723
</hsp>