sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A1945-A580
X
>2ZJR-X569-X559
X
>3I56-01120-01150
X
>3CC7-01120-01150
X
>3F1G-A1340-A947
X
>3F1E-A1340-A947
X
>2VQF-A1340-A947
X
</seq>
<hsp>
0 1:0.451822380434
0 2:0.950726593243
0 3:0.996988014302
0 4:0.987101479525
0 5:0.986026592019
0 6:0.922131107395
1 2:0.94948826509
1 3:0.999999036634
1 4:0.929274520074
1 5:0.927985722727
1 6:0.856922541803
2 3:0.0585032952063
2 4:0.455557972047
2 5:0.455777071466
2 6:0.442510010351
3 4:0.460810679014
3 5:0.461150421563
3 6:0.45461770034
4 5:0.00254088963572
4 6:0.110640339064
5 6:0.108987356022
</hsp>