sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2HO7-B33-B32
X
>2GCV-B33-B32
X
>2H0Z-B33-B32
X
>2GCS-B33-B32
X
>2H0W-B33-B32
X
>2H0X-B33-B32
X
>2HO6-B33-B32
X
>3B4A-B33-B32
X
>2H0S-B33-B32
X
>3B4B-B33-B32
X
>3B4C-B33-B32
X
>1FFK-01173-01172
X
</seq>
<hsp>
0 1:0.0762625527577
0 2:0.0894088843471
0 3:0.0598791438309
0 4:0.0745201626629
0 5:0.0570134490916
0 6:0.0552863675421
0 7:0.0558453838016
0 8:0.0542640056475
0 9:0.0886380867458
0 10:0.0616648821342
0 11:0.977235368102
1 2:0.0799428318944
1 3:0.0199802672009
1 4:0.0198358682534
1 5:0.0336504514917
1 6:0.0581119065997
1 7:0.0409875528269
1 8:0.0571053916611
1 9:0.0945078327956
1 10:0.0818880877132
1 11:0.996111567079
2 3:0.0790723378095
2 4:0.0887079569996
2 5:0.074014306913
2 6:0.0815624154138
2 7:0.097467685752
2 8:0.0803422068281
2 9:0.084843855586
2 10:0.061959474515
2 11:0.971666298484
3 4:0.0230189269388
3 5:0.0290527289145
3 6:0.0497153403569
3 7:0.0295307396307
3 8:0.0540906132313
3 9:0.0947088257632
3 10:0.076426852879
3 11:0.993329496397
4 5:0.0327724128916
4 6:0.0511990235142
4 7:0.0357932417699
4 8:0.0564143916024
4 9:0.094111560596
4 10:0.0900790962774
4 11:0.999999136598
5 6:0.0460238899585
5 7:0.0345602458313
5 8:0.0365932342857
5 9:0.0776385421258
5 10:0.068007945863
5 11:0.979541436261
6 7:0.0620465290766
6 8:0.0564947795833
6 9:0.0613492899318
6 10:0.0697525668762
6 11:0.987171450386
7 8:0.0514274436374
7 9:0.105091555678
7 10:0.0868642827227
7 11:0.993018292888
8 9:0.0666997963566
8 10:0.0655455994669
8 11:0.980291414925
9 10:0.0679292931872
9 11:0.968757321574
10 11:0.957582602108
</hsp>