sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-5751-5750
X
>3R8T-A669-A668
X
>3R8S-A669-A668
X
>3U5D-1745-1744
X
>3KNI-A678-A677
X
>3F1H-A690-A689
X
>3F1F-A690-A689
X
</seq>
<hsp>
0 1:0.724408890041
0 2:0.443572404094
0 3:0.100978183851
0 4:0.819551304494
0 5:0.583643785744
0 6:0.580694829385
1 2:0.391822242547
1 3:0.754485755983
1 4:1.0
1 5:0.473042912302
1 6:0.468338602265
2 3:0.480121972705
2 4:0.794883440135
2 5:0.47566678501
2 6:0.47689414876
3 4:0.83380729492
3 5:0.590164510814
3 6:0.587605957753
4 5:0.755016272963
4 6:0.770030077379
5 6:0.031872288651
</hsp>