sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J00-A1365-A1364
X
>2J02-A1365-A1364
X
>3OH7-A864-A863
X
>3F1F-A156-A155
X
>3F1H-A156-A155
X
>3OI1-A864-A863
X
>3OGE-A1365-A1364
X
>3OHZ-A864-A863
X
>3OH5-A864-A863
X
>3OGY-A1365-A1364
X
>3OHD-A1077-A1076
X
>3OHC-A1077-A1076
X
>2V3C-M2-M1
X
>3CCR-958-957
X
>3CCL-958-957
X
</seq>
<hsp>
0 1:0.0059148363071
0 2:0.297943374943
0 3:0.210337325553
0 4:0.21013527341
0 5:0.20335545257
0 6:0.237107749088
0 7:0.220374966489
0 8:0.306543382336
0 9:0.239370825209
0 10:0.453787681426
0 11:0.452939876197
0 12:0.640567079858
0 13:0.999544756345
0 14:0.921641729999
1 2:0.297022151881
1 3:0.209131915396
1 4:0.208857557815
1 5:0.202618216912
1 6:0.236848566053
1 7:0.219352403881
1 8:0.305530512807
1 9:0.238748092383
1 10:0.453054348522
1 11:0.452251554632
1 12:0.641161926167
1 13:0.999999245382
1 14:0.922395390984
2 3:0.129705187037
2 4:0.13044801512
2 5:0.11269536467
2 6:0.156609199637
2 7:0.100557452095
2 8:0.0268695221405
2 9:0.161009954977
2 10:0.20130896343
2 11:0.202560068418
2 12:0.397395480918
2 13:0.766160810775
2 14:0.698567391005
3 4:0.00471672224445
3 5:0.093264753212
3 6:0.110979155794
3 7:0.0901993976081
3 8:0.13912310806
3 9:0.110540502654
3 10:0.286746564221
3 11:0.287150528651
3 12:0.4932939052
3 13:0.860852779335
3 14:0.789182716922
4 5:0.0946187528244
4 6:0.112881500962
4 7:0.0914080150185
4 8:0.139945490762
4 9:0.112196322026
4 10:0.28845775326
4 11:0.288905670054
4 12:0.495058950691
4 13:0.8625407487
4 14:0.791085982697
5 6:0.129634442355
5 7:0.0291416139982
5 8:0.119098089373
5 9:0.133539323154
5 10:0.259200326857
5 11:0.259500298151
5 12:0.470961363298
5 13:0.833499619364
5 14:0.760853150528
6 7:0.127500390714
6 8:0.162903462904
6 9:0.0239682391231
6 10:0.271994334208
6 11:0.271182262291
6 12:0.465705478432
6 13:0.834074908996
6 14:0.754410275387
7 8:0.102377115404
7 9:0.128511067785
7 10:0.246783701132
7 11:0.24776711912
7 12:0.463347586361
7 13:0.82476051212
7 14:0.753459430951
8 9:0.165888909919
8 10:0.193229061033
8 11:0.194992042733
8 12:0.390018742209
8 13:0.755992680517
8 14:0.689014385676
9 10:0.275046620881
9 11:0.274849959118
9 12:0.47807319157
9 13:0.844863881669
9 14:0.766111943782
10 11:0.00966047612729
10 12:0.293068846848
10 13:0.62301448545
10 14:0.558608961141
11 12:0.288863650521
11 13:0.619678594215
11 14:0.554549987952
12 13:0.385723713024
12 14:0.312862452234
13 14:0.108339579314
</hsp>