sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHJ-A1761-A1760
X
>2VQE-A1105-A1104
X
>3R8O-A523-A522
X
>3R8S-A1524-A1523
X
>3R8S-B2-B1
X
>3KNI-A1522-A1521
X
>3R8S-A1165-A1164
X
>3OGY-A390-A389
X
>3R8N-A523-A522
X
>3U5F-61617-61616
X
>3R8T-A1697-A1696
X
>2J01-A2257-A2256
X
</seq>
<hsp>
0 1:0.587543274871
0 2:0.203418744836
0 3:0.554808701586
0 4:0.384449891857
0 5:0.372071150345
0 6:0.594321841283
0 7:0.250162864454
0 8:0.239811223844
0 9:0.298765148318
0 10:0.2595611519
0 11:0.283076842478
1 2:0.595255907717
1 3:0.905886037993
1 4:0.801733734722
1 5:0.760980319177
1 6:1.0
1 7:0.685550794364
1 8:0.617318228034
1 9:0.739296367945
1 10:0.756157356173
1 11:0.731062131885
2 3:0.473205060519
2 4:0.308437203751
2 5:0.239306156063
2 6:0.477417808945
2 7:0.206434276287
2 8:0.133019954292
2 9:0.211090977476
2 10:0.216034797996
2 11:0.183177610165
3 4:0.195157616015
3 5:0.371501625021
3 6:0.369637486972
3 7:0.520097781239
3 8:0.569580005024
3 9:0.390568718779
3 10:0.435251549595
3 11:0.474165320907
4 5:0.237004200401
4 6:0.309888256677
4 7:0.339553601512
4 8:0.399561099928
4 9:0.227450166101
4 10:0.256038843367
4 11:0.301934844607
5 6:0.332531543441
5 7:0.225935175518
5 8:0.29297505567
5 9:0.11236099372
5 10:0.190344696731
5 11:0.168144995027
6 7:0.433697570476
6 8:0.506024799571
6 9:0.345853347805
6 10:0.372704574874
6 11:0.377657367336
7 8:0.189988901691
7 9:0.150663335649
7 10:0.130596245603
7 11:0.111947769571
8 9:0.254316139478
8 10:0.229310100426
8 11:0.171046331544
9 10:0.105924706396
9 11:0.112647419107
10 11:0.0981985957113
</hsp>