sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1760-A1759
X
>3F1H-A1119-A1118
X
>3F1F-A1119-A1118
X
>3CCJ-958-957
X
>3OHD-A1365-A1364
X
>3OHC-A1365-A1364
X
>3CC7-958-957
X
>3CCS-958-957
X
>3R8T-A1567-A1566
X
>2QA4-958-957
X
>3CCV-958-957
X
>2OTL-958-957
X
</seq>
<hsp>
0 1:0.347418431562
0 2:0.348418290795
0 3:0.923105701624
0 4:0.292306748016
0 5:0.29251097411
0 6:0.921628034665
0 7:0.928120167783
0 8:0.860338025357
0 9:0.96988196622
0 10:0.932195300938
0 11:0.925134187475
1 2:0.0044826955089
1 3:0.955800081372
1 4:0.0787435685449
1 5:0.0835360875195
1 6:0.983203897265
1 7:0.962983071869
1 8:0.939899880015
1 9:1.0
1 10:0.973231112182
1 11:0.975026327518
2 3:0.953596625528
2 4:0.0796195509787
2 5:0.0841897991201
2 6:0.981019478076
2 7:0.960679062545
2 8:0.937736476287
2 9:0.997793730507
2 10:0.971069669637
2 11:0.972802990363
3 4:0.949179995905
3 5:0.948379180588
3 6:0.123946688018
3 7:0.102009291378
3 8:0.26468490523
3 9:0.0859382108145
3 10:0.0808615072814
3 11:0.127452328567
4 5:0.0130566278242
4 6:0.97062870275
4 7:0.955266427225
4 8:0.922053493862
4 9:0.993153689057
4 10:0.962475361099
4 11:0.96262186647
5 6:0.969153658768
5 7:0.953918013572
5 8:0.919397236176
5 9:0.992115541039
5 10:0.961618900341
5 11:0.960850065361
6 7:0.0817765610735
6 8:0.18746490031
6 9:0.113080715707
6 10:0.108453602346
6 11:0.0568780162489
7 8:0.21507664157
7 9:0.0760578301479
7 10:0.104874311007
7 11:0.0697939939599
8 9:0.275327434897
8 10:0.269632265645
8 11:0.18305323061
9 10:0.0767944448079
9 11:0.105741646653
10 11:0.106182150665
</hsp>