sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1951-A1950
X
>3GX7-A68-A67
X
>3GX2-A68-A67
X
>3IQN-A68-A67
X
>3GX6-A68-A67
X
>3GX5-A68-A67
X
>2GIS-A68-A67
X
</seq>
<hsp>
0 1:0.999999705938
0 2:0.970372719092
0 3:0.847285946957
0 4:0.946583235189
0 5:0.915418147361
0 6:0.859938918484
1 2:0.198964914851
1 3:0.250662873111
1 4:0.200246016634
1 5:0.179390042044
1 6:0.18000262046
2 3:0.354837060201
2 4:0.250464578816
2 5:0.261631413554
2 6:0.258848741084
3 4:0.184973589
3 5:0.12727589045
3 6:0.101773758056
4 5:0.0904356647865
4 6:0.129113064941
5 6:0.0804401850702
</hsp>