sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-01378-01376
X
>3OH5-A1263-A1261
X
>3CCS-01379-01377
X
>3CCQ-01379-01377
X
>3CCR-01379-01377
X
>2QEX-01379-01377
X
>1YIT-01379-01377
X
>3CD6-01379-01377
X
>1YJ9-01379-01377
X
>1YJW-01379-01377
X
>3CCV-01379-01377
X
>2OTL-01379-01377
X
>1KD1-A1379-A1377
X
>1K9M-A1379-A1377
X
</seq>
<hsp>
0 1:0.88318779361
0 2:0.653525331384
0 3:0.7618355652
0 4:0.495770582368
0 5:0.864121848807
0 6:0.658453124339
0 7:0.553199813696
0 8:0.769425415467
0 9:0.896084264281
0 10:0.768698824317
0 11:0.772047273761
0 12:1.0
0 13:0.942711395173
1 2:0.48221646277
1 3:0.560605422328
1 4:0.783603426231
1 5:0.457547672428
1 6:0.703645328271
1 7:0.616362737139
1 8:0.498458958554
1 9:0.596451496857
1 10:0.610394308026
1 11:0.633346112257
1 12:0.762286630974
1 13:0.733209597583
2 3:0.285407514611
2 4:0.423372193616
2 5:0.448288746001
2 6:0.32325038564
2 7:0.392959450199
2 8:0.32935708608
2 9:0.466521510082
2 10:0.512229200497
2 11:0.466085560302
2 12:0.683784503251
2 13:0.683744511375
3 4:0.495245447115
3 5:0.319036846748
3 6:0.46143036576
3 7:0.539025792796
3 8:0.452945599542
3 9:0.442600269109
3 10:0.555266583565
3 11:0.508451981216
3 12:0.663059926452
3 13:0.720957637341
4 5:0.726377983917
4 6:0.426677885961
4 7:0.451680948429
4 8:0.557578971123
4 9:0.64212947758
4 10:0.660380176579
4 11:0.662702873307
4 12:0.881357244082
4 13:0.906405555162
5 6:0.693231040174
5 7:0.685950249239
5 8:0.575159488205
5 9:0.510006935414
5 10:0.5887077259
5 11:0.606891151519
5 12:0.715570800969
5 13:0.76161656644
6 7:0.358336786019
6 8:0.322908228372
6 9:0.5143642828
6 10:0.525697856593
6 11:0.395168349639
6 12:0.642309742146
6 13:0.632988263112
7 8:0.341877288505
7 9:0.567228668378
7 10:0.414342696168
7 11:0.367118768669
7 12:0.563938425418
7 13:0.526087782397
8 9:0.314777756614
8 10:0.329559447492
8 11:0.282546156385
8 12:0.497719645586
8 13:0.501952679494
9 10:0.317852104952
9 11:0.39933889477
9 12:0.529502217962
9 13:0.639205915266
10 11:0.254883605319
10 12:0.38260012485
10 13:0.456263901875
11 12:0.286096833615
11 13:0.302050735373
12 13:0.253433045192
</hsp>