sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OXM-A69-A68
X
>3PDR-A20-A19
X
>3U5H-52620-52619
X
>3PDR-X20-X19
X
>3OWI-A69-A68
X
>3OWW-A69-A68
X
>3OXE-A69-A68
X
>3OXM-B69-B68
X
>3OWW-B68-B67
X
>3OXE-B69-B68
X
>3OWI-B69-B68
X
>3OWZ-A69-A68
X
</seq>
<hsp>
0 1:0.719236713844
0 2:0.474807856324
0 3:0.591467762743
0 4:0.321306849736
0 5:0.353865969345
0 6:0.386617289438
0 7:0.374952230939
0 8:0.311549285889
0 9:0.339835069637
0 10:0.336635032537
0 11:0.310990644718
1 2:1.0
1 3:0.376996870667
1 4:0.807508538726
1 5:0.670754587046
1 6:0.80001769712
1 7:0.733493441615
1 8:0.736398291965
1 9:0.655353414289
1 10:0.619705913096
1 11:0.545315811027
2 3:0.793638778278
2 4:0.53086967148
2 5:0.516179099415
2 6:0.604986863297
2 7:0.44901196267
2 8:0.41398846277
2 9:0.575087778683
2 10:0.483993755223
2 11:0.547432674046
3 4:0.685161484107
3 5:0.569623204955
3 6:0.695083090187
3 7:0.542712971091
3 8:0.551968523519
3 9:0.551653724993
3 10:0.456370949215
3 11:0.436179189983
4 5:0.349213973555
4 6:0.192446920981
4 7:0.319465784761
4 8:0.230896347294
4 9:0.190388318583
4 10:0.311315094302
4 11:0.396413531509
5 6:0.474329803826
5 7:0.365600385457
5 8:0.298222204945
5 9:0.342720040677
5 10:0.289720716434
5 11:0.369416551837
6 7:0.30996549195
6 8:0.284348515855
6 9:0.185722681466
6 10:0.332043330928
6 11:0.374670004163
7 8:0.119854357663
7 9:0.248470434729
7 10:0.140398085065
7 11:0.258967309491
8 9:0.199648204024
8 10:0.132953961699
8 11:0.271754121281
9 10:0.193999401542
9 11:0.259502651947
10 11:0.175020962234
</hsp>