sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHZ-A1857-A1856
X
>3OI1-A1857-A1856
X
>3OHJ-A1857-A1856
X
>3OHK-A1857-A1856
X
>3OH5-A1857-A1856
X
>2J01-A1857-A1856
X
>2J03-A1857-A1856
X
>3OH7-A1857-A1856
X
>3R8T-A2512-A2511
X
>3MUT-R46-R45
X
>3CCM-02455-02452
X
</seq>
<hsp>
0 1:0.0293906151008
0 2:0.154079561786
0 3:0.145162493934
0 4:0.142370698948
0 5:0.188324693186
0 6:0.193390244393
0 7:0.149171120725
0 8:0.565428320868
0 9:0.436504408989
0 10:0.979123107048
1 2:0.141101946325
1 3:0.131440421799
1 4:0.1338792816
1 5:0.1835842474
1 6:0.188138801249
1 7:0.138541997124
1 8:0.554165587256
1 9:0.42718038172
1 10:0.977801326154
2 3:0.0220229488834
2 4:0.134322646598
2 5:0.15022203186
2 6:0.156484204845
2 7:0.128745266335
2 8:0.499874143626
2 9:0.3616485117
2 10:0.999998877094
3 4:0.119021168932
3 5:0.141615651325
3 6:0.146289536499
3 7:0.112322985194
3 8:0.504469559279
3 9:0.360420961271
3 10:0.998488222663
4 5:0.105255498787
4 6:0.0977508159811
4 7:0.0229441127297
4 8:0.496314056346
4 9:0.340445680258
4 10:0.953496198151
5 6:0.0198608728843
5 7:0.104629186284
5 8:0.435178789471
5 9:0.279404376595
5 10:0.910926015423
6 7:0.0961798226732
6 8:0.439498855779
6 9:0.278615833487
6 10:0.914121276715
7 8:0.493545700253
7 9:0.335044535283
7 10:0.956723449134
8 9:0.22638158916
8 10:0.649216611506
9 10:0.75720991629
</hsp>