sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH5-A2105-A2079
X
>3OH7-A2105-A2079
X
>3CCS-02155-02128
X
>3CCM-02155-02128
X
>3CCR-02155-02128
X
>2J03-A2152-A2126
X
>2J01-A2152-A2126
X
</seq>
<hsp>
0 1:0.107964083613
0 2:0.692596585379
0 3:0.711981955788
0 4:0.91566432523
0 5:0.484518468079
0 6:0.462955607001
1 2:0.748614024958
1 3:0.72165492511
1 4:0.956812867996
1 5:0.463033090299
1 6:0.448564878518
2 3:0.820287614124
2 4:0.368185995231
2 5:0.821448012869
2 6:0.814205304218
3 4:0.999532970819
3 5:0.500188214413
3 6:0.488613706734
4 5:0.99102103513
4 6:1.0
5 6:0.0704680920064
</hsp>