sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ6-02590-02588
X
>1YJ9-02590-02588
X
>1VQ5-02590-02588
X
>1VQ4-02590-02588
X
>3CCE-02590-02588
X
>1QVG-02590-02588
X
>2H0S-B58-B56
X
</seq>
<hsp>
0 1:0.069106943043
0 2:0.0411744392781
0 3:0.0402331537125
0 4:0.0785528640486
0 5:0.0728851459071
0 6:0.985511797385
1 2:0.0765374036847
1 3:0.0771576885608
1 4:0.118061337192
1 5:0.0747525050145
1 6:0.946838158874
2 3:0.0285597767476
2 4:0.05731808294
2 5:0.0675859407522
2 6:0.991168292684
3 4:0.0686400081548
3 5:0.0818757666056
3 6:0.97626799587
4 5:0.0901746171216
4 6:0.999999710352
5 6:0.997550936492
</hsp>