sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1N32-A1297-A1298
X
>2UUA-A1297-A1298
X
>3R8T-A1550-A1551
X
>1XMQ-A1292-A1293
X
>2VQF-A1297-A1298
X
>3OHY-A1297-A1298
X
>3OI0-A1297-A1298
X
>2UXC-A1297-A1298
X
>2UUB-A1297-A1298
X
>3SLM-A33-A34
X
>2VQE-A1297-A1298
X
>1FJG-A1297-A1298
X
</seq>
<hsp>
0 1:0.254978708902
0 2:0.442403384759
0 3:0.14622029698
0 4:0.191272978262
0 5:0.532400707817
0 6:0.530808650808
0 7:0.173243601198
0 8:0.25654069913
0 9:0.645648831767
0 10:0.263954322627
0 11:0.25212949482
1 2:0.269876140634
1 3:0.284934456466
1 4:0.234771191704
1 5:0.603341776403
1 6:0.603069402193
1 7:0.196097882963
1 8:0.171437068569
1 9:0.773837112995
1 10:0.222030537829
1 11:0.320354144126
2 3:0.487870830674
2 4:0.421817316528
2 5:0.696706793426
2 6:0.69592209867
2 7:0.350498775318
2 8:0.284832295559
2 9:0.999999931954
2 10:0.363171887477
2 11:0.51926276688
3 4:0.121733400585
3 5:0.447078352729
3 6:0.445637728671
3 7:0.194955009023
3 8:0.230678402461
3 9:0.594208579327
3 10:0.199675091684
3 11:0.138163918135
4 5:0.495715092122
4 6:0.494121143129
4 7:0.201482426728
4 8:0.164930478684
4 9:0.686620278222
4 10:0.15341363628
4 11:0.16099507402
5 6:0.0128689510971
5 7:0.515275604636
5 8:0.485880788649
5 9:0.73729680937
5 10:0.465558907738
5 11:0.43876337949
6 7:0.515161807639
6 8:0.484626418176
6 9:0.73993201427
6 10:0.465467043002
6 11:0.439149755798
7 8:0.177637821247
7 9:0.670958564157
7 10:0.153641459791
7 11:0.242471267612
8 9:0.783802774833
8 10:0.118321611267
8 11:0.253984722895
9 10:0.700423053752
9 11:0.585581496454
10 11:0.192341851578
</hsp>