sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A1970-A583
X
>3CD6-01142-01141
X
>3OH7-A268-A267
X
>3OH5-A268-A267
X
>3CCS-01142-01141
X
>3CCE-01142-01141
X
>3CCV-01142-01141
X
>3CC7-01142-01141
X
</seq>
<hsp>
0 1:0.975174762836
0 2:0.603649246265
0 3:0.60445415661
0 4:0.958785646532
0 5:1.0
0 6:0.974578288123
0 7:0.949678279862
1 2:0.952899923131
1 3:0.957778556113
1 4:0.0563513098214
1 5:0.0886336870258
1 6:0.0529429523434
1 7:0.0979142113757
2 3:0.00728446435168
2 4:0.961482078328
2 5:0.960722326919
2 6:0.957591910394
2 7:0.931610617184
3 4:0.966408080836
3 5:0.965646493351
3 6:0.96246111973
3 7:0.936423381943
4 5:0.12936455084
4 6:0.0742402062146
4 7:0.12461469979
5 6:0.0625622177066
5 7:0.0657779598344
6 7:0.0630946173657
</hsp>