sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2VQF-A727-A726
X
>3KNH-A718-A717
X
>2UXC-A727-A726
X
>2VQE-A727-A726
X
>2UUB-A727-A726
X
>3F1H-A2862-A2861
X
>3F1F-A2862-A2861
X
>2UUA-A727-A726
X
</seq>
<hsp>
0 1:0.814806278501
0 2:0.31807603189
0 3:0.116421481062
0 4:0.0895865432613
0 5:0.939881817574
0 6:0.945262238364
0 7:0.226227146246
1 2:0.629332616816
1 3:0.9049248422
1 4:0.857148087238
1 5:0.930342674111
1 6:0.930658351738
1 7:0.764107251273
2 3:0.406292249433
2 4:0.345002716244
2 5:0.746820172131
2 6:0.752072831236
2 7:0.308862541638
3 4:0.0657113919394
3 5:0.994687564039
3 6:0.999997885698
3 7:0.235638164307
4 5:0.943378517652
4 6:0.948642565335
4 7:0.192645799005
5 6:0.0152164964429
5 7:0.912830975579
6 7:0.916446521603
</hsp>