sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A2419-A2250
X
>3OI1-A2257-A2088
X
>3OHZ-A2257-A2088
X
>3OH7-A2257-A2088
X
>3OH5-A2257-A2088
X
>3OHK-A2257-A2088
X
>3OHJ-A2257-A2088
X
>3G78-A358-A375
X
</seq>
<hsp>
0 1:0.0658148318983
0 2:0.0658720340301
0 3:0.0498489980711
0 4:0.0489200565317
0 5:0.0394340135826
0 6:0.0395945801608
0 7:0.972595058581
1 2:0.023471163806
1 3:0.0759017568397
1 4:0.0713395657463
1 5:0.075349649657
1 6:0.0822396952085
1 7:0.989565452226
2 3:0.0721541223726
2 4:0.0658447410368
2 5:0.0719853329915
2 6:0.074908970756
2 7:0.997809718523
3 4:0.0167356615396
3 5:0.0715171079808
3 6:0.0697398947651
3 7:0.997092027906
4 5:0.0738051871705
4 6:0.0692604570238
4 7:0.999999606968
5 6:0.0212010025794
5 7:0.963190160084
6 7:0.967353715967
</hsp>