sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHC-A952-A949
X
>3OHD-A952-A949
X
>3OHC-A503-A501
X
>3OHD-A503-A501
X
>2V3C-N55-N52
X
>3OHY-A503-A501
X
>3OI0-A503-A501
X
>1N32-A503-A501
X
>3OGE-A503-A501
X
>3OGY-A503-A501
X
>1FJG-A503-A501
X
</seq>
<hsp>
0 1:0.00313130219821
0 2:0.884162226947
0 3:0.881808427741
0 4:0.99960615393
0 5:0.837472485681
0 6:0.83664298159
0 7:0.879129911554
0 8:0.887779240425
0 9:0.890231980807
0 10:0.849880375863
1 2:0.884199596237
1 3:0.881824294984
1 4:0.999999837074
1 5:0.837403604407
1 6:0.836576160145
1 7:0.879145816922
1 8:0.887717754855
1 9:0.890156590705
1 10:0.849853007386
2 3:0.00849090348023
2 4:0.237206706982
2 5:0.100525942504
2 6:0.10244993313
2 7:0.0752341489652
2 8:0.0632109818188
2 9:0.0635501086842
2 10:0.126482294103
3 4:0.242024618763
3 5:0.100339628481
3 6:0.101943564105
3 7:0.0730249784351
3 8:0.0654157160441
3 9:0.0649656530489
3 10:0.126076154999
4 5:0.291989090154
4 6:0.295603707563
4 7:0.258667520456
4 8:0.212294639456
4 9:0.212772135318
4 10:0.296862555322
5 6:0.00638776699846
5 7:0.0847011428288
5 8:0.102767797752
5 9:0.105095902618
5 10:0.0481292115631
6 7:0.0835658970275
6 8:0.106310988338
6 9:0.108269340731
6 10:0.0476660897508
7 8:0.0855929896866
7 9:0.0825929617091
7 10:0.0916655281732
8 9:0.0103808364194
8 10:0.117590911436
9 10:0.117815189141
</hsp>