sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OI1-A184-A185
X
>3OHZ-A184-A185
X
>2J01-A1881-A1882
X
>2J03-A1881-A1882
X
>3CCR-01581-01582
X
>3F1H-A187-A188
X
>3F1F-A187-A188
X
>1VQ9-01581-01582
X
>1VQN-01581-01582
X
>2OTL-01581-01582
X
</seq>
<hsp>
0 1:0.191940793156
0 2:0.736240700874
0 3:0.734744448214
0 4:0.773122085756
0 5:0.475934527618
0 6:0.489343262785
0 7:0.650706118445
0 8:0.599666781039
0 9:0.365689963024
1 2:0.755316736788
1 3:0.749042814227
1 4:0.796021009586
1 5:0.420829818854
1 6:0.417486576147
1 7:0.680372048182
1 8:0.618463841316
1 9:0.414134967661
2 3:0.0301662159856
2 4:0.544326106084
2 5:1.0
2 6:0.991769285919
2 7:0.431882473984
2 8:0.427589837481
2 9:0.525664677026
3 4:0.538190016722
3 5:0.992207531969
3 6:0.983344458902
3 7:0.421246297538
3 8:0.416624354076
3 9:0.517623840496
4 5:0.989079210189
4 6:0.98586170671
4 7:0.275269310262
4 8:0.269144114777
4 9:0.507264947271
5 6:0.0587095272981
5 7:0.860907526949
5 8:0.844457428321
5 9:0.650834903034
6 7:0.862035597587
6 8:0.843675978065
6 9:0.657813848203
7 8:0.117600514542
7 9:0.319249142027
8 9:0.281823524317
</hsp>