sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCM-02268-02267
X
>3CCL-02268-02267
X
>3CCE-02268-02267
X
>3CCQ-02268-02267
X
>1YIT-02268-02267
X
>3CC7-02268-02267
X
>1YIJ-02268-02267
X
>2OTL-02268-02267
X
>1YI2-02268-02267
X
>1YJ9-02268-02267
X
>1VQ4-02268-02267
X
</seq>
<hsp>
0 1:0.446182158787
0 2:0.613050711897
0 3:0.542713034688
0 4:0.427982891276
0 5:0.634375212362
0 6:0.616700052354
0 7:0.839158410128
0 8:0.585929480868
0 9:0.703375736986
0 10:0.704648834911
1 2:0.6537795239
1 3:0.493343952872
1 4:0.49434492784
1 5:0.428473962242
1 6:0.754990364809
1 7:0.999989976457
1 8:0.770941457669
1 9:0.708185732147
1 10:0.825205163999
2 3:0.463863086841
2 4:0.372193601417
2 5:0.746935690798
2 6:0.546248896783
2 7:0.70169325961
2 8:0.630888915909
2 9:0.972097931795
2 10:0.601599074719
3 4:0.249844823267
3 5:0.564066842516
3 6:0.512450124464
3 7:0.87177146735
3 8:0.569511332425
3 9:0.913286794682
3 10:0.666405905001
4 5:0.587301299149
4 6:0.404182570703
4 7:0.772975825921
4 8:0.453469716226
4 9:0.852429340337
4 10:0.53776736592
5 6:0.754180937102
5 7:0.958271156712
5 8:0.672725675736
5 9:0.494354695089
5 10:0.696778540541
6 7:0.489810399011
6 8:0.309469046208
6 9:0.882500654708
6 10:0.322601738174
7 8:0.581143051108
7 9:0.904064876825
7 10:0.424546514809
8 9:0.726520708874
8 10:0.267794278364
9 10:0.730801751311
</hsp>