sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3MXH-R7-R6
X
>3OHD-A1117-A1116
X
>3OHC-A1117-A1116
X
>3MUR-R7-R6
X
>3OGY-A1117-A1116
X
>3OGE-A1117-A1116
X
>3OHY-A1117-A1116
X
>3OI0-A1117-A1116
X
>3G8T-E3-E2
X
>3B4A-A3-A2
X
>2H0Z-A2-A1
X
</seq>
<hsp>
0 1:0.477342552532
0 2:0.478612474664
0 3:0.208640635061
0 4:0.561332030448
0 5:0.562912538567
0 6:0.383557002649
0 7:0.380182553128
0 8:0.673772165744
0 9:0.807674886504
0 10:0.82863627864
1 2:0.00551123153314
1 3:0.617603974375
1 4:0.119073018709
1 5:0.120872098897
1 6:0.122573638947
1 7:0.126640631381
1 8:0.583880932639
1 9:0.664357504716
1 10:0.642427162079
2 3:0.618811815909
2 4:0.117907618666
2 5:0.119600686621
2 6:0.124073736771
2 7:0.128332642562
2 8:0.58459979173
2 9:0.665303967956
2 10:0.643042094775
3 4:0.710991466518
3 5:0.712461543159
3 6:0.529961329123
3 7:0.52577345057
3 8:0.841588279325
3 9:0.970572954126
3 10:0.999999733253
4 5:0.00400042571722
4 6:0.193908567542
4 7:0.199237218383
4 8:0.543529045387
4 9:0.619478616251
4 10:0.584875957414
5 6:0.195614779542
5 7:0.201001554568
5 8:0.544771265664
5 9:0.620682863486
5 10:0.585821022196
6 7:0.00751515021312
6 8:0.534219189228
6 9:0.629610776444
6 10:0.619613237081
7 8:0.535271952829
7 9:0.630336234128
7 10:0.621222984127
8 9:0.207836255624
8 10:0.233019956641
9 10:0.099781008932
</hsp>