sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3SKZ-B9-B31
X
>3GX2-A64-A22
X
>3GX3-A64-A22
X
>3GX5-A64-A22
X
>3IQR-A64-A22
X
>3I56-0406-02283
X
>3IQN-A64-A22
X
>3GX7-A64-A22
X
>2QA4-0406-02282
X
</seq>
<hsp>
0 1:0.895027002668
0 2:0.782685210722
0 3:0.671365324135
0 4:0.583164362059
0 5:0.537252147333
0 6:0.698077051963
0 7:1.0
0 8:0.741691603679
1 2:0.237117084277
1 3:0.308005354241
1 4:0.398484967366
1 5:0.422164458992
1 6:0.312029861314
1 7:0.250842130834
1 8:0.467374308193
2 3:0.267515862504
2 4:0.385722230273
2 5:0.342057098353
2 6:0.31052485054
2 7:0.363380085803
2 8:0.446991348389
3 4:0.210697027653
3 5:0.145147458644
3 6:0.182274838402
3 7:0.406677542885
3 8:0.266802998317
4 5:0.16801639235
4 6:0.180944561211
4 7:0.514025127116
4 8:0.309330535265
5 6:0.213401537809
5 7:0.512692812555
5 8:0.274108959299
6 7:0.355822957682
6 8:0.221458122301
7 8:0.438024996808
</hsp>