sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A854-A853
X
>3OH5-A854-A853
X
>3OHJ-A854-A853
X
>3OHK-A854-A853
X
>3OHZ-A854-A853
X
>3OI1-A854-A853
X
>2ZJR-X1516-X1515
X
>1HR2-A86-A85
X
</seq>
<hsp>
0 1:0.0109089576673
0 2:0.0407757551301
0 3:0.0348464170162
0 4:0.0623095797533
0 5:0.0638040006956
0 6:0.591747827799
0 7:1.0
1 2:0.038391385199
1 3:0.0346315423036
1 4:0.0612939088731
1 5:0.0641162926127
1 6:0.589455293731
1 7:0.995899873147
2 3:0.0139401477755
2 4:0.0523575962321
2 5:0.0583694305875
2 6:0.589723954744
2 7:0.99990059371
3 4:0.0456201222551
3 5:0.0496111923639
3 6:0.583348637174
3 7:0.996889458095
4 5:0.0117058071728
4 6:0.542490209663
4 7:0.959109794666
5 6:0.539397748327
5 7:0.959676942002
6 7:0.606086403593
</hsp>