sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-52279-52278
X
>3KNI-A1586-A1585
X
>1YLS-D13-D12
X
>3U5D-12278-12277
X
>3F1F-A866-A865
X
>3F1H-A866-A865
X
>1SJ4-R21-R62
X
</seq>
<hsp>
0 1:0.131065962564
0 2:0.516062483865
0 3:0.0713576960235
0 4:0.501384643006
0 5:0.50123749209
0 6:0.999999940977
1 2:0.451689236718
1 3:0.114756458642
1 4:0.458703401046
1 5:0.458880041779
1 6:0.942936467882
2 3:0.524671102746
2 4:0.358021757704
2 5:0.356811303089
2 6:0.692501745199
3 4:0.493205244176
3 5:0.493365253191
3 6:0.990352436378
4 5:0.00427574718379
4 6:0.759729125771
5 6:0.758983635513
</hsp>