sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1E-A1176-A1030
X
>3F1G-A1176-A1030
X
>2VQE-A1176-A1030
X
>2UXC-A1176-A1030
X
>2UUA-A1176-A1030
X
>1XMQ-A1171-A1025
X
</seq>
<hsp>
0 1:0.0437270716435
0 2:0.963891036447
0 3:0.876657542453
0 4:0.712336439775
0 5:0.999994823239
1 2:0.948192642317
1 3:0.859329772294
1 4:0.691678078529
1 5:0.981064989767
2 3:0.448396486694
2 4:0.513225322219
2 5:0.381009441515
3 4:0.342970386256
3 5:0.365295002213
4 5:0.52140689458
</hsp>