sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A250-A277
X
>3OI1-A250-A277
X
>3OHZ-A250-A277
X
>3F1H-A253-A280
X
>3F1F-A253-A280
X
>3OH5-A250-A277
X
>3OH7-A250-A277
X
>3OHJ-A250-A277
X
>3OHK-A250-A277
X
>3Q3Z-V25-A24
X
>2J03-A250-A277
X
>2J01-A250-A277
X
</seq>
<hsp>
0 1:0.99999023189
0 2:0.921802609725
0 3:0.936581507355
0 4:0.935370462903
0 5:0.877431806724
0 6:0.941474394361
0 7:0.900432736253
0 8:0.94097689243
0 9:0.661570015181
0 10:0.759541264205
0 11:0.789193185682
1 2:0.134792292278
1 3:0.3099769989
1 4:0.30934259124
1 5:0.402498790276
1 6:0.388162088226
1 7:0.376975191272
1 8:0.372398058164
1 9:0.703084651666
1 10:0.674830341141
1 11:0.672674766401
2 3:0.356236188532
2 4:0.353527449051
2 5:0.393615698976
2 6:0.406007278363
2 7:0.395633711431
2 8:0.403043845327
2 9:0.65834696848
2 10:0.649691966708
2 11:0.652995304121
3 4:0.0536954050112
3 5:0.393082574422
3 6:0.373402148866
3 7:0.336925404489
3 8:0.324061971855
3 9:0.617833578837
3 10:0.666952067201
3 11:0.669290635685
4 5:0.37562903412
4 6:0.355365209016
4 7:0.315347689685
4 8:0.299014197898
4 9:0.643211725085
4 10:0.671197660879
4 11:0.674503504093
5 6:0.0869813784496
5 7:0.130874711435
5 8:0.168777471441
5 9:0.619713645912
5 10:0.487317948411
5 11:0.495893919578
6 7:0.0976104315767
6 8:0.117398868635
6 9:0.659359447153
6 10:0.50867660125
6 11:0.512160879898
7 8:0.0611942189131
7 9:0.6520959924
7 10:0.48305754264
7 11:0.487321228184
8 9:0.684365982248
8 10:0.522874264728
8 11:0.525920168996
9 10:0.506714852214
9 11:0.520737129391
10 11:0.0413440261673
</hsp>